The iceLogo web server and SOAP service for determining protein consensus sequences
نویسندگان
چکیده
The iceLogo web server and SOAP service implement the previously published iceLogo algorithm. iceLogo builds on probability theory to visualize protein consensus sequences in a format resembling sequence logos. Peptide sequences are compared against a reference sequence set that can be tailored to the studied system and the used protocol. As such, not only over- but also underrepresented residues can be visualized in a statistically sound manner, which further allows the user to easily analyse and interpret conserved sequence patterns in proteins. The web application and SOAP service can be found free and open to all users without the need for a login on http://iomics.ugent.be/icelogoserver/main.html.
منابع مشابه
Investigation on Reliability Estimation of Loosely Coupled Software as a Service Execution Using Clustered and Non-Clustered Web Server
Evaluating the reliability of loosely coupled Software as a Service through the paradigm of a cluster-based and non-cluster-based web server is considered to be an important attribute for the service delivery and execution. We proposed a novel method for measuring the reliability of Software as a Service execution through load testing. The fault count of the model against the stresses of users ...
متن کاملAliasServer: a web server to handle multiple aliases used to refer to proteins
UNLABELLED AliasServer provides services that facilitate the assembly of data or datasets that make use of different identifiers for refering to the same protein. This resource relies on a database which contains, for a given organism, a non-redundant list of protein sequences associated with a set of aliases. AVAILABILITY AliasServer is available as an interactive Web server at http://cbi.la...
متن کاملHigh Fuzzy Utility Based Frequent Patterns Mining Approach for Mobile Web Services Sequences
Nowadays high fuzzy utility based pattern mining is an emerging topic in data mining. It refers to discover all patterns having a high utility meeting a user-specified minimum high utility threshold. It comprises extracting patterns which are highly accessed in mobile web service sequences. Different from the traditional fuzzy approach, high fuzzy utility mining considers not only counts of mob...
متن کاملDetection and Elimination of Byzantine Faults Using SOAP Handlers in Web Environment
Detection and elimination of Byzantine faults in the Web services environment by applying the features of SOAP handlers is the principle objective of this work. The Web services may sometimes be infused with suspicious modules intentionally for them to behave in an abnormal manner. By introducing faulty aspects into the service deployment on the fly makes the Web service to generate Byzantine f...
متن کاملA SOAP-based Infrastructure for Service Broker
As Web service becomes pervasive, the importance of scripting capability for connecting distributed components leads to a new XML technology, SOAP. Although SOAP is ready to use in B2B situations, some underlying infrastructure should resolve two issues; exploring parallelism and script customization. We adopt both the SOAP and mobile agent technologies and test the idea with Apache SOAP server.
متن کامل